PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAQ82555.1 to PF06722 (EryCIII-like_C)

CAZy::AAQ82555.1 has 458 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    3.2e-19   55.4   0.0    1.3e-18   53.5   0.0    2.0  2  CAZy::AAQ82555.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAQ82555.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.1   0.0      0.36      0.36      19      50 ..      42      72 ..      37      77 .. 0.70
   2 !   53.5   0.0   1.3e-18   1.3e-18      23     125 ..     328     434 ..     320     441 .. 0.91

  Alignments for each domain:
  == domain 1  score: -3.1 bits;  conditional E-value: 0.36
    EryCIII-like_C 19 dedarpdlrelpdnvRlvdfvPlgvllptcaa 50
                      de++r+++++l d v  v f  lg ++p  +a
  CAZy::AAQ82555.1 42 DEHRREEVEALSD-VSKVSFASLGEVVPELSA 72
                      6667777766655.555999999888887665 PP

  == domain 2  score: 53.5 bits;  conditional E-value: 1.3e-18
    EryCIII-like_C  23 rpdlrelpdnvRlvdfvP..lgvll.ptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlsk.deltsdsiakavae 111
                        p+ ++lpdn+R+  +vP  l+vl+ p+ +++  hgG+ + + ++ fG Pqvv p  +d++ +a r  ++G +++l k +++++d + + +++
  CAZy::AAQ82555.1 328 LPEAGSLPDNLRVESWVPsqLDVLAhPNVSVFFSHGGGNAYHEGVYFGKPQVVRPLWVDCFDQAVRGRDFGISLTLDKpHTVDPDDVVDKLTR 420
                       68999*************777888757999*********************************************9762689*********** PP

    EryCIII-like_C 112 vvedpayraaaakl 125
                       v+ dpa+r  a++l
  CAZy::AAQ82555.1 421 VTSDPAFRTEAERL 434
                       ***********998 PP



Or compare CAZy::AAQ82555.1 to CDD or PaperBLAST