PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::ABO27084.1 to PF06722 (EryCIII-like_C)

CAZy::ABO27084.1 has 424 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    8.4e-42  128.7   0.1    1.4e-41  128.0   0.1    1.3  1  CAZy::ABO27084.1  


Domain annotation for each sequence (and alignments):
>> CAZy::ABO27084.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.0   0.1   1.4e-41   1.4e-41       2     145 .]     267     411 ..     266     411 .. 0.98

  Alignments for each domain:
  == domain 1  score: 128.0 bits;  conditional E-value: 1.4e-41
    EryCIII-like_C   2 avldqvaelDaEivvaldedarpdlrelpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpde.adaavrarrvaelGagi 93 
                       +++d++a+lD E+v++l+ ++  ++r++pdnvR+vd+vPl  llptc+aivHhgG+g+t++a+   vP +++p + +d+   ar+v+ +Gag+
  CAZy::ABO27084.1 267 ELFDHIADLDIELVATLNRSQLAEVRKVPDNVRTVDYVPLRLLLPTCSAIVHHGGGGTTAAAVEQRVPHLIIPVPkWDEENTARHVVSRGAGL 359
                       6889*********************************************************************988***************** PP

    EryCIII-like_C  94 vlskdeltsdsiakavaevvedpayraaaaklaeeiaaePsPtEvakkleel 145
                       ++  ++   ++ ++ + +++++p+++ +a  l e+++a+PsP E ++ le l
  CAZy::ABO27084.1 360 AMDGQDFSVAEFRRNLLRLLDEPSFQRGADALYEDMLATPSPVETVPVLERL 411
                       **********************************************999876 PP



Or compare CAZy::ABO27084.1 to CDD or PaperBLAST