PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::ABO27086.1 to PF06722 (EryCIII-like_C)

CAZy::ABO27086.1 has 404 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    2.4e-38  117.6   0.3    4.5e-38  116.7   0.3    1.4  1  CAZy::ABO27086.1  


Domain annotation for each sequence (and alignments):
>> CAZy::ABO27086.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  116.7   0.3   4.5e-38   4.5e-38      12     144 ..     257     391 ..     247     392 .. 0.95

  Alignments for each domain:
  == domain 1  score: 116.7 bits;  conditional E-value: 4.5e-38
                       SEEEE---TTTTSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE--..TTT--H CS
    EryCIII-like_C  12 aeivvtldararedlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialp..kdelda 102
                        e+++t+++r r +l++lP n Rl+d  Pl  +L++caa+vhhGGaG+ +ta  +G+Pq+vlp+ aD++ +++r+a++Ga ia     +++d+
  CAZy::ABO27086.1 257 VEVLATVEERYRAELGELPANTRLIDPTPLDLILESCAAVVHHGGAGTAMTATAFGLPQLVLPQMADQFGHGDRLAAVGAAIAFDtvAEQDDP 349
                       59********************************************************************************9862257899* PP

                       HHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHH CS
    EryCIII-like_C 103 dslaeavarvledpayreaaaklaeealaePkPtevvkklve 144
                         l+ ++a +l +p +r+aa++l++e+   P+P  v+++l  
  CAZy::ABO27086.1 350 GLLRDSMAALLSEPGHRKAATELRAEMQGMPTPGAVARELAR 391
                       *************************************99875 PP



Or compare CAZy::ABO27086.1 to CDD or PaperBLAST