PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::ABX71119.1 to PF06722 (EryCIII-like_C)

CAZy::ABX71119.1 has 429 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    5.5e-38  116.4   0.6    9.5e-38  115.6   0.6    1.4  1  CAZy::ABX71119.1  


Domain annotation for each sequence (and alignments):
>> CAZy::ABX71119.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  115.6   0.6   9.5e-38   9.5e-38       2     145 .]     274     421 ..     273     421 .. 0.90

  Alignments for each domain:
  == domain 1  score: 115.6 bits;  conditional E-value: 9.5e-38
                       TTHHHHHTSSSEEEE---TTTTSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHH.HHHHHHHHTSEE CS
    EryCIII-like_C   2 elldelgevDaeivvtldararedlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlv.raqrvaelGaGi 93 
                       el+d+++++D e+v+tl+a++   ++ +PdnvR+vd+vPl +lLptcaai+hhG  G+ ++a+ +  Pq++ +    + +  a+ v ++GaG+
  CAZy::ABX71119.1 274 ELFDAVADMDIELVATLNADQLASVRRIPDNVRTVDYVPLNQLLPTCAAIMHHGSGGTFAAAVAHRTPQLIASRPSGQSMdIARYVEQRGAGL 366
                       689********************************************************************99877665516899999****9 PP

                       E--...TTT--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHHH CS
    EryCIII-like_C  94 alp...kdeldadslaeavarvledpayreaaaklaeealaePkPtevvkklvel 145
                       +      ++  a + ++ ++r+l+d++++++a  l ee +  P+P++vv+ l++l
  CAZy::ABX71119.1 367 IAAdieSEDFSATEARAQLERILGDRSFQAGADALHEEVARMPSPNDVVPVLEKL 421
                       9751114555677888999*******************************99876 PP



Or compare CAZy::ABX71119.1 to CDD or PaperBLAST