PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::CAE17545.1 to PF06722 (EryCIII-like_C)

CAZy::CAE17545.1 has 397 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    5.6e-36  109.9   4.8    7.6e-36  109.5   2.0    2.1  2  CAZy::CAE17545.1  


Domain annotation for each sequence (and alignments):
>> CAZy::CAE17545.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.7   0.0     0.025     0.025      58      87 ..      38      67 ..      13      91 .. 0.66
   2 !  109.5   2.0   7.6e-36   7.6e-36       3     145 .]     250     392 ..     248     392 .. 0.97

  Alignments for each domain:
  == domain 1  score: 0.7 bits;  conditional E-value: 0.025
                      HHHHHHHHTT--EEE---SHHHHHHHHHHH CS
    EryCIII-like_C 58 GstltalhaGvPqivlpdgaDrlvraqrva 87
                         +t l  G+P + ++   D ++  +r+ 
  CAZy::CAE17545.1 38 AMHATILRSGMPAVPVGSDVDYVAVRKRTL 67
                      445678999*********999987666664 PP

  == domain 2  score: 109.5 bits;  conditional E-value: 7.6e-36
                       THHHHHTSSSEEEE---TTTTSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE- CS
    EryCIII-like_C   3 lldelgevDaeivvtldararedlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGial 95 
                       +l++l+ +D e+vvt+ a +re l+   ++vR+ + +Pl+ l+p+c+ +vh GG  + lta+h+GvPq+ +p+  +++  aq +   G    l
  CAZy::CAE17545.1 250 VLEALAGLDVEVVVTVTAAERERLGPSAPGVRVLESMPLHLLMPGCDLLVHQGGFMTALTAAHHGVPQLLVPQLPNQVSDAQVLEGAGVARRL 342
                       899******************************************************************************999988888899 PP

                       -TTT--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHHH CS
    EryCIII-like_C  96 pkdeldadslaeavarvledpayreaaaklaeealaePkPtevvkklvel 145
                       p +e    sl++av++vl+ +ayr aaa+l+ e la+P+P++v+ +l el
  CAZy::CAE17545.1 343 PAEEAGVGSLRAAVEEVLGGRAYRVAAARLRTEILAQPSPADVAADLAEL 392
                       999*******************************************9987 PP



Or compare CAZy::CAE17545.1 to CDD or PaperBLAST