CharProtDB::CH_013412 has 154 amino acids
Query: DUF2001 [M=139]
Accession: PF09393.14
Description: Phage tail tube protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-50 154.5 5.2 1.1e-49 154.3 5.2 1.0 1 CharProtDB::CH_013412
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_013412
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 154.3 5.2 1.1e-49 1.1e-49 2 139 .] 3 146 .. 2 146 .. 0.98
Alignments for each domain:
== domain 1 score: 154.3 bits; conditional E-value: 1.1e-49
DUF2001 2 tleakdtisGtlGelfi....ngeelaevkkleakveltkeevkvlgklgkqhKvtgwkgtgtltlykvtSrfrkllaeyiktGkdtr 85
+l+ +d+isG++G++fi ++e ++++k+lea+v+++keev++l+k+g+q K+tg kg+g++t+y vtS+f++++ +y+k+G+dt
CharProtDB::CH_013412 3 FLKGRDVISGQEGTAFIhidgKNEFMFYIKELEATVKKNKEEVRTLNKRGTQVKATGFKGEGKMTIYGVTSTFKEMMLDYMKNGRDTF 90
68899***************99****************************************************************** PP
DUF2001 86 feiivkleDpea.vGkervvlkdvnldeltlakfeag.elleeevpFtFedfelld 139
f+i+v+++D ++ +G+++ +l+++nlde+ + +++++ + leeev+FtFed+++l+
CharProtDB::CH_013412 91 FDIQVTNDDATSsIGRQTTILRECNLDEVVMGQLKVEeDFLEEEVNFTFEDVDILE 146
*****************************************************996 PP
Or compare CharProtDB::CH_013412 to CDD or PaperBLAST