PaperBLAST – Find papers about a protein or its homologs

 

Align D2EDM4 to PF06722 (EryCIII-like_C)

D2EDM4 has 426 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.3e-25   74.6   0.1    7.3e-25   73.8   0.1    1.3  1  D2EDM4    


Domain annotation for each sequence (and alignments):
>> D2EDM4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.8   0.1   7.3e-25   7.3e-25      23     127 ..     291     394 ..     272     414 .. 0.89

  Alignments for each domain:
  == domain 1  score: 73.8 bits;  conditional E-value: 7.3e-25
                     TSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE--TTT--HHHHHHHHHHHHH-HH CS
  EryCIII-like_C  23 redlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialpkdeldadslaeavarvledpa 117
                     +e l+ lP+ v   ++ Plg+lLp+ca++vh GG G++  al aGvPq+ lp   D++ +a+r++ lG+G+ l+ + l  ++l+ a+ r+ledpa
          D2EDM4 291 QEPLRGLPNHVLQRAYAPLGALLPSCAGLVHPGGIGAMSLALAAGVPQVLLPCAHDQFDNAERLVRLGCGMRLGAP-LREQELRGALWRLLEDPA 384
                     566899********************************************************************98.56789************* PP

                     HHHHHHHHHH CS
  EryCIII-like_C 118 yreaaaklae 127
                     + +a  ++ e
          D2EDM4 385 MAAACRRFME 394
                     *999988765 PP



Or compare D2EDM4 to CDD or PaperBLAST