PaperBLAST – Find papers about a protein or its homologs

 

Align D2S332 to PF13349 (DUF4097)

D2S332 has 276 amino acids

Query:       DUF4097  [M=247]
Accession:   PF13349.12
Description: Toastrack DUF4097
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.9e-18   52.2   5.8    2.9e-18   52.2   5.8    2.6  2  D2S332    


Domain annotation for each sequence (and alignments):
>> D2S332  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   10.1   6.0   2.1e-05   2.1e-05     140     190 ..     130     177 ..      28     184 .. 0.75
   2 !   52.2   5.8   2.9e-18   2.9e-18     103     246 ..     131     272 ..      88     273 .. 0.89

  Alignments for each domain:
  == domain 1  score: 10.1 bits;  conditional E-value: 2.1e-05
  DUF4097 140 klettsGdieleslsgkdldakstsGDikvsntklagslkitatsGdidls 190
              +++t  G i+++++ g+ l+a ++ GD++++   ++g++++t++ G i+l 
   D2S332 130 DVDTRTGEIDVSDVRGD-LTAVTETGDVRIE--AVDGTVSATTDAGTIELV 177
              56677777777777777.8888888888888..677788888888888776 PP

  == domain 2  score: 52.2 bits;  conditional E-value: 2.9e-18
  DUF4097 103 lktssGdislkdvkaeelkvkstsGdvsidgseakelklettsGdieleslsgkdldakstsGDikvsntklagslkitatsGdidlslpesasagvdasst 204
              ++t  G i ++dv++ +l+  ++ Gdv+i+ +  + +  +t+ G iel +      ++++ sGD+ ++   ++ +++i+++sGd++l+lp+  ++++d+++ 
   D2S332 131 VDTRTGEIDVSDVRG-DLTAVTETGDVRIEAVDGT-VSATTDAGTIELVDPASI-EHLETDSGDVTATLPDIERDATIETSSGDVELRLPDRLDLTLDITTD 229
              578889*******97.68888999*******9987.556899999999876555.5**********************************99********** PP

  DUF4097 205 sGdvsipe.kleeqekeekriygteksakkkvdvstssGDiti 246
              sG++s++      +   ++ i+++ +++ ++++v+t+ G++t+
   D2S332 230 SGNISVSGvADLPKMAGDSLIEAVVGQGTHRLEVRTETGTVTV 272
              *******977778889999***********************9 PP



Or compare D2S332 to CDD or PaperBLAST