PaperBLAST – Find papers about a protein or its homologs

 

Align I1M744 to PF05142 (DUF702)

I1M744 has 349 amino acids

Query:       DUF702  [M=151]
Accession:   PF05142.17
Description: Domain of unknown function (DUF702)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    6.9e-66  207.6   7.6    6.9e-66  207.6   7.6    1.5  2  I1M744    


Domain annotation for each sequence (and alignments):
>> I1M744  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.7   0.2      0.43      0.43      74      79 ..      97     102 ..      85     129 .. 0.41
   2 !  207.6   7.6   6.9e-66   6.9e-66       2     150 ..     135     292 ..     134     293 .. 0.80

  Alignments for each domain:
  == domain 1  score: -2.7 bits;  conditional E-value: 0.43
  DUF702  74 sekskr 79 
             +  +k+
  I1M744  97 HYMKKQ 102
             111111 PP

  == domain 2  score: 207.6 bits;  conditional E-value: 6.9e-66
  DUF702   2 gisCqdCgnqakkdCahrrCRtCCksrgfdCatHvkstwvpaakrrerqqqlaalqaqaaeaeaeaassasssekskrpre.e..saaasassts.attsks. 99 
             g++CqdCgnqakkdC+ rrCRtCCksrgfdC+tHvkstwvpaa+rrerq  ++a++a         a s++s++++k+pr  +  ++++s++sts +t+++s 
  I1M744 135 GTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMTSATAA--------VAGSSGSTSGTKKPRLiAsqTTTTSHTSTSnTTPPRSf 229
             789*********************************************433333221........12345667788999964333566667777643333336 PP

  DUF702 100 ............eslpeevsseAvFrcvrvsavddgeeevaYqtavkigGhvfkGiLydqGle 150
                         eslp +v+++AvF+cvrv+av+dg++e+aYq++vkigGhvfkG+LydqG+e
  I1M744 230 dtssshqdagfkESLPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGFLYDQGVE 292
             6666666666655************************************************98 PP



Or compare I1M744 to CDD or PaperBLAST