PaperBLAST – Find papers about a protein or its homologs

 

Align I7H0H9 to PF13252 (DUF4043)

I7H0H9 has 381 amino acids

Query:       DUF4043  [M=376]
Accession:   PF13252.11
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.6e-13   36.3   0.1    5.6e-11   28.0   0.0    2.1  2  I7H0H9    


Domain annotation for each sequence (and alignments):
>> I7H0H9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    6.3   0.0   0.00022   0.00022      57     134 ..      64     141 ..      60     164 .. 0.88
   2 !   28.0   0.0   5.6e-11   5.6e-11     208     368 ..     187     374 ..     173     378 .. 0.82

  Alignments for each domain:
  == domain 1  score: 6.3 bits;  conditional E-value: 0.00022
  DUF4043  57 Lvnklagapitgnevaegrgealslssdelrinelrkavdaggtmdqqrspvdlralaraalkdyldkledqealvkm 134
              + ++l+g ++ gn+  e +   l++ s+++  +  ++      +       +d+ ++  ++l+ +++  +d+ +++ +
   I7H0H9  64 IKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASL 141
              5689********************************9999998888889999**************988777776655 PP

  == domain 2  score: 28.0 bits;  conditional E-value: 5.6e-11
  DUF4043 208 klegdkaaqddelyVlllhPaqysdlradgklrqlqknAiaratvdknPlFkgeaglyngvllikiprairfvnadsg.kiaaatfs............... 293
                   ++  ++ +y++ll  +q ++l+ad+++++l k   a a  dk  l+ g +g+ +   +i++    +f  + +   i +  f                
   I7H0H9 187 MQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRK-LYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNsSISDSDFMrylnkanvssivtpr 287
              3344566678999**********************99.5566669********************977776666654303355555588999999******* PP

  DUF4043 294 .................aasyavdrslllGaQAlakafgkkkngaipfiwseklldhgsrlevlaetidGlaktrfnvddGggak..ptdfgvi 368
                               +  + +  + l+Ga A++ a +k+    ++f   e  +d g++  v++  + G++k r++  dG  +    +d+ vi
   I7H0H9 288 qfkeklnqekdekkrsiNKEISI--GCLIGASAVLLAGSKE----TRFYIDET-VDAGRKSLVGVDCLLGVSKARYQSTDGVVTPydNQDYAVI 374
              *************9977666666..99**********9999....88888877.9***********************9997765446666665 PP



Or compare I7H0H9 to CDD or PaperBLAST