NP_001002088.1 has 220 amino acids
Query: DUF3522 [M=184]
Accession: PF12036.12
Description: Protein of unknown function (DUF3522)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-52 162.3 4.1 9.3e-52 162.1 4.1 1.1 1 NP_001002088.1
Domain annotation for each sequence (and alignments):
>> NP_001002088.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 162.1 4.1 9.3e-52 9.3e-52 2 184 .] 4 185 .. 3 185 .. 0.95
Alignments for each domain:
== domain 1 score: 162.1 bits; conditional E-value: 9.3e-52
DUF3522 2 qllqlllltlSnlaflpaiyvalkrklvfEavvylftmlfSllYHacdspg..vlclekedvlqlseleWhrlDnigsilaiwvtlvaladldea 94
+++++ll t+S+l+f+pa+ va+kr++++Ea+vy+ftm+f ++YHacd pg lc++k+d+l+++ +++g+ +++wvtl+al d+de+
NP_001002088.1 4 FIAKMLLPTISSLVFVPAASVAAKRGFHMEAMVYFFTMFFTAIYHACDGPGlsILCFMKYDILEYF-------SVYGTAISMWVTLLALGDFDEP 91
5899************************************************9*************.......********************** PP
DUF3522 95 lksllkylglllvailqekdrwnlantlipilvgllilivvw...slr.....rrlkklntqkllpgllllalaliffllgldetednyrivHsl 181
+s+l ++g+l+ a+ +++dr ++ + +pi +++++++v+w + k+++tq++ pg+++ alal +l++++e++ +y++vHs+
NP_001002088.1 92 KRSSLTMFGVLTAAVRIYQDRLGYGIYSGPIGTAVFMITVKWlqkM-KekkglYPDKSVYTQQVGPGCCFGALAL--MLRFYFEEW-DYAYVHSF 182
******************************************7750.2555566789******************..*********.789***** PP
DUF3522 182 WHi 184
+H+
NP_001002088.1 183 YHV 185
**6 PP
Or compare NP_001002088.1 to CDD or PaperBLAST