NP_001027253.1 has 690 amino acids
Query: DUF4201 [M=177]
Accession: PF13870.10
Description: Domain of unknown function (DUF4201)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-51 160.2 16.8 2.2e-51 160.2 16.8 2.9 3 NP_001027253.1
Domain annotation for each sequence (and alignments):
>> NP_001027253.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.7 0.5 0.12 0.12 100 137 .. 357 394 .. 353 397 .. 0.84
2 ? 0.2 2.7 0.029 0.029 77 116 .. 430 469 .. 424 475 .. 0.85
3 ! 160.2 16.8 2.2e-51 2.2e-51 1 176 [. 496 671 .. 496 672 .. 0.99
Alignments for each domain:
== domain 1 score: -1.7 bits; conditional E-value: 0.12
DUF4201 100 lkerqeklaklrkelyevklerdklrkqnkklkkqggl 137
l++++ +++kl +l + ++++++ +n+ l k++++
NP_001027253.1 357 LRSKNLDKSKLMNRLFKEVEDHHWVSHDNNLLTKRLTE 394
67778889999999999999999999999999998775 PP
== domain 2 score: 0.2 bits; conditional E-value: 0.029
DUF4201 77 halahlkeklhmlsekleelkkelkerqeklaklrkelye 116
h l+ +++ ++m ++ e+l +el+ +q++ ++ ++l+e
NP_001027253.1 430 HWLNRTRQAEQMHLAEKERLLSELERMQREDNEKIERLEE 469
6789999999999999999999999999988887777765 PP
== domain 3 score: 160.2 bits; conditional E-value: 2.2e-51
DUF4201 1 mrakrnelsklrlelitlkhtlakiqeklekkeelgegLtlidFeqlqienqalsekieernkeLkrlkkkvtktvhalahlkeklhmlseklee 95
mrakr+ ls++rl li ++h ++i++k++++e+++++++l+ ++++ +++q++ ++++++n+eL+r+ + v++++h+++hl+++++ l++k++e
NP_001027253.1 496 MRAKRDALSATRLILIIRQHDNSYIKKKVDEIEAISGEVKLETYLSADNDVQQMVTTLNNKNAELERMCTLVKTKIHTISHLRCRRKLLNRKFRE 590
89********************************************************************************************* PP
DUF4201 96 lkkelkerqeklaklrkelyevklerdklrkqnkklkkqggllrvPaLleDYdktkeeveekrksvkkLrrkvkilekrik 176
+k+el+erq+++ lr+e+y+++l+++kl +q+k+++++gg++++P+Ll D+d+t+++++ k++s+ +L++++++l kri+
NP_001027253.1 591 AKDELRERQKRQIALRDEVYNCNLTHNKLLDQIKEVRREGGIMCYPKLLADFDRTEKFIAIKQASIVELKTQHDNLLKRIE 671
*******************************************************************************97 PP
Or compare NP_001027253.1 to CDD or PaperBLAST