NP_001069046.1 has 467 amino acids
Query: DUF4078 [M=86]
Accession: PF13300.10
Description: Domain of unknown function (DUF4078)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-30 91.4 12.3 1.8e-30 91.4 12.3 3.1 3 NP_001069046.1
Domain annotation for each sequence (and alignments):
>> NP_001069046.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.4 4.0 0.043 0.043 39 68 .. 67 96 .. 64 100 .. 0.83
2 ? -2.4 0.3 0.33 0.33 43 58 .. 120 135 .. 113 150 .. 0.56
3 ! 91.4 12.3 1.8e-30 1.8e-30 1 86 [] 214 302 .. 214 302 .. 0.98
Alignments for each domain:
== domain 1 score: 0.4 bits; conditional E-value: 0.043
DUF4078 39 kDeeeRkkqmeeLeelReeTeeqrkereek 68
kD+e+ +++++L+++Re+ ee+ k e++
NP_001069046.1 67 KDAEQKIEEQKTLDKAREKLEEKAKLYEKM 96
799999999999999999998887766665 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.33
DUF4078 43 eRkkqmeeLeelReeT 58
+k+me++ + R
NP_001069046.1 120 DKQKEMEAIGASRGYR 135
5677777777777432 PP
== domain 3 score: 91.4 bits; conditional E-value: 1.8e-30
DUF4078 1 kmeelarkrdrsatpp.eeihYda..dkEvRtkGvgfyaFskDeeeRkkqmeeLeelReeTeeqrkereekkekrkaeleerrkkirer 86
+++++++++++++++p +++hY++ ++E+R++Gvg++aF++D+e R+kqm++Le+lRe+T++qr++re+ kekrka le+r++k+r++
NP_001069046.1 214 QRQQWEEEEREALRRPmGPVHYEDirENEARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRTKRENIKEKRKAILEARLAKLRQK 302
799***********************************************************************************996 PP
Or compare NP_001069046.1 to CDD or PaperBLAST