NP_001071639.1 has 113 amino acids
Query: DUF4939 [M=112]
Accession: PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.1e-59 183.1 0.0 6.7e-59 182.9 0.0 1.0 1 NP_001071639.1
Domain annotation for each sequence (and alignments):
>> NP_001071639.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 182.9 0.0 6.7e-59 6.7e-59 1 112 [] 2 113 .] 2 113 .] 0.96
Alignments for each domain:
== domain 1 score: 182.9 bits; conditional E-value: 6.7e-59
DUF4939 1 drrkklrivlmera.rlrkrrwrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyra 94
d+r +l+++l++ + r+ +rrwrnpipfpe+fdG+++rlpefivqt sym+vde+tfssdalkv+flitrl+G al+wv+pyi+k+splln+yr+
NP_001071639.1 2 DGRVQLIKALLALPiRPATRRWRNPIPFPETFDGDTDRLPEFIVQTGSYMFVDENTFSSDALKVTFLITRLTGPALQWVIPYIKKESPLLNDYRG 96
67899****999985679***************************************************************************** PP
DUF4939 95 flnemkeefGwedddedf 112
fl+emk++fGwe +dedf
NP_001071639.1 97 FLAEMKRVFGWE-EDEDF 113
************.88886 PP
Or compare NP_001071639.1 to CDD or PaperBLAST