NP_001071641.1 has 113 amino acids
Query: DUF4939 [M=112]
Accession: PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-58 181.7 0.0 1.8e-58 181.6 0.0 1.0 1 NP_001071641.1
Domain annotation for each sequence (and alignments):
>> NP_001071641.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 181.6 0.0 1.8e-58 1.8e-58 2 112 .] 3 113 .] 2 113 .] 0.96
Alignments for each domain:
== domain 1 score: 181.6 bits; conditional E-value: 1.8e-58
DUF4939 2 rrkklrivlmera.rlrkrrwrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyraf 95
+r +l+++l++r+ r+ rrwrnpipfpe+fdG+++rlpefivqt sym+vde+tfs+dalkv+flitrl+G al+wv+pyi+k+spll++yr+f
NP_001071641.1 3 GRVQLMKALLARPlRPAARRWRNPIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIKKESPLLSDYRGF 97
6889*******995679****************************************************************************** PP
DUF4939 96 lnemkeefGwedddedf 112
l+emk++fGwe +dedf
NP_001071641.1 98 LAEMKRVFGWE-EDEDF 113
***********.88886 PP
Or compare NP_001071641.1 to CDD or PaperBLAST