NP_001097646.1 has 571 amino acids
Query: DUF3399 [M=76]
Accession: PF11879.12
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-22 65.5 0.8 5.5e-22 64.4 0.8 1.6 1 NP_001097646.1
Domain annotation for each sequence (and alignments):
>> NP_001097646.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 64.4 0.8 5.5e-22 5.5e-22 2 67 .. 471 538 .. 470 546 .. 0.78
Alignments for each domain:
== domain 1 score: 64.4 bits; conditional E-value: 5.5e-22
DUF3399 2 tsllEsQHHHLLhCLEKTTnheFvd.Eqtyeenclevsl.qkrpsrspslssqegltssCCsrrakrs 67
++++E QHHHLL+CLEKTT++eFv+ E ++ + + + ++s + s s gl +sCC+r++ ++
NP_001097646.1 471 EDIFELQHHHLLRCLEKTTDREFVElEIPFNGQPKRPGSpSPMASPAHSTNSAAGLLQSCCGRCCSQR 538
689**********************9****966554433033444555666679*********99854 PP
Or compare NP_001097646.1 to CDD or PaperBLAST