NP_001101374.1 has 850 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-10 26.7 0.0 8e-10 24.8 0.0 1.9 1 NP_001101374.1
Domain annotation for each sequence (and alignments):
>> NP_001101374.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.8 0.0 8e-10 8e-10 30 132 .. 686 761 .. 669 770 .. 0.88
Alignments for each domain:
== domain 1 score: 24.8 bits; conditional E-value: 8e-10
UPF0020 30 epllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdv 124
+ ++D +CG G+ I al g++++ ++D+d+ ++ ar+Nae +gv+d+ief + d+ L + + dv
NP_001101374.1 686 DIIVDAFCGVGGNTIQFALTGKRVI--------------------------AIDIDPVKIDLARNNAEVYGVADKIEFICGDFLLLA-PCLKADV 753
5677888888888888888888877..........................9********************************999.88899** PP
UPF0020 125 ivtnpPYG 132
+ pP+G
NP_001101374.1 754 VFLSPPWG 761
*******9 PP
Or compare NP_001101374.1 to CDD or PaperBLAST