NP_001127830.4 has 1357 amino acids
Query: DUF4939 [M=112]
Accession: PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.9e-17 48.1 0.0 9.9e-17 47.1 0.0 1.4 1 NP_001127830.4
Domain annotation for each sequence (and alignments):
>> NP_001127830.4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.1 0.0 9.9e-17 9.9e-17 13 105 .. 179 271 .. 168 275 .. 0.92
Alignments for each domain:
== domain 1 score: 47.1 bits; conditional E-value: 9.9e-17
DUF4939 13 rarlrkrrwrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyraflnemkeefGw 105
a l k++ + +p p +f+G+ efiv + + sd+l+v +++++l+G alew+ ++k+spl++++ afl+ m ++f +
NP_001127830.4 179 EAVLAKGLHEGRMPIPATFSGDRREYHEFIVLCQLILQSYPGMYYSDRLRVGYVMCHLSGMALEWAKDLMEKNSPLVSDFPAFLEAMSDMFEY 271
556678899999*******************99999999999***********************************************9977 PP
Or compare NP_001127830.4 to CDD or PaperBLAST