NP_001128360.1 has 1358 amino acids
Query: DUF4939 [M=112]
Accession: PF16297.9
Description: Domain of unknown function (DUF4939)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-18 52.7 0.0 4.7e-18 51.4 0.0 1.6 1 NP_001128360.1
Domain annotation for each sequence (and alignments):
>> NP_001128360.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 51.4 0.0 4.7e-18 4.7e-18 21 105 .. 196 280 .. 181 283 .. 0.93
Alignments for each domain:
== domain 1 score: 51.4 bits; conditional E-value: 4.7e-18
DUF4939 21 wrnpipfpelfdGeserlpefivqtlsymlvdektfssdalkvaflitrlkGralewvmpyiqkdspllnnyraflnemkeefGw 105
+p p++f+G+ + efiv + + f +d+l+v ++i +l+G alew+ +q++spl++++ afl+ m e+f +
NP_001128360.1 196 NAGQLPAPKHFSGDRREFHEFIVLCQLTLQSYPRMFYNDRLRVGYVINHLSGLALEWAKALLQENSPLIGDFPAFLEAMSEVFEY 280
556789*******************9999999**************************************************987 PP
Or compare NP_001128360.1 to CDD or PaperBLAST