NP_001141287.1 has 275 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-40 122.3 0.1 4.7e-40 122.3 0.1 1.6 2 NP_001141287.1
Domain annotation for each sequence (and alignments):
>> NP_001141287.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 122.3 0.1 4.7e-40 4.7e-40 1 115 [. 89 202 .. 89 203 .. 0.91
2 ? -2.2 0.2 0.2 0.2 67 76 .. 207 216 .. 204 234 .. 0.51
Alignments for each domain:
== domain 1 score: 122.3 bits; conditional E-value: 4.7e-40
PGG 1 eeklkearntlllvAtLiatvtFaAgftlPGGywqdds..kssaGkpila.kkk.afkvFvvsnaiAlvaSlvavvlllisslvedeakslkkkl 91
e++lke+r +l+++A+L+a+vt++Ag+++PGG+wq+d+ ++ aG+p+l+ k + ++ vF+++n++A+v+S+v++vll+ +++ + ++++ k+
NP_001141287.1 89 EKWLKEMRGWLMVLAVLAASVTYQAGLNPPGGFWQQDDaeGNVAGTPVLQsKFPkRYTVFFYFNSTAFVTSVVIIVLLM-NES---F-YHSEAKV 178
58**********************************9985478*******8888*************************.433...3.555677* PP
PGG 92 rvllvllvlallsllvAFaaglyl 115
+l +++vl++++l++A++ag+++
NP_001141287.1 179 EALEIIVVLDMAGLMGAYIAGCTR 202
*********************976 PP
== domain 2 score: -2.2 bits; conditional E-value: 0.2
PGG 67 Slvavvllli 76
S+ ++vl l+
NP_001141287.1 207 SIYIIVLTLV 216
4444444332 PP
Or compare NP_001141287.1 to CDD or PaperBLAST