NP_001147469.1 has 349 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.6e-14 37.3 0.0 2.9e-13 35.8 0.0 1.6 2 NP_001147469.1
Domain annotation for each sequence (and alignments):
>> NP_001147469.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.8 0.0 2.9e-13 2.9e-13 4 109 .. 86 190 .. 83 197 .. 0.82
2 ? -2.2 0.0 0.14 0.14 80 103 .. 313 335 .. 310 338 .. 0.82
Alignments for each domain:
== domain 1 score: 35.8 bits; conditional E-value: 2.9e-13
PDH_N 4 alrrkgfkvtvigydideekakaalelglvdeatddieavkea..divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk. 94
r+g + + + + +++aa +lg+ + ++ + + e+ d+vlla+ + + vl+ l l+++ l Dv svKe + + l +l+
NP_001147469.1 86 TFARQG--H-TLLAHSRTDHSAAASALGAAFFTDP--HDLCEChpDVVLLATSILSAEAVLRSLPLhRLRRSTLFADVLSVKEFPRNLLLSSLPp 175
555555..4.4444555666777779***999888..35666668******************97647*************************** PP
PDH_N 95 gksfvgghPmaGtek 109
g ++ +hPm+G+e
NP_001147469.1 176 GFDVICTHPMFGPES 190
*************74 PP
== domain 2 score: -2.2 bits; conditional E-value: 0.14
PDH_N 80 svKekvvkelekllkgksfvgghP 103
svK+++ + l+++l+ k++ g P
NP_001147469.1 313 SVKKRLFDGLHDVLR-KQLFEGSP 335
999999999999999.77777766 PP
Or compare NP_001147469.1 to CDD or PaperBLAST