NP_001290399.1 has 311 amino acids
Query: TRAPP14_N [M=373]
Accession: PF15806.11
Description: TRAPP14 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-53 167.0 0.0 8.5e-53 166.0 0.0 1.5 2 NP_001290399.1
Domain annotation for each sequence (and alignments):
>> NP_001290399.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 166.0 0.0 8.5e-53 8.5e-53 274 373 .] 1 100 [. 1 100 [. 0.99
2 ? -2.3 0.0 0.11 0.11 75 93 .. 245 264 .. 215 307 .. 0.53
Alignments for each domain:
== domain 1 score: 166.0 bits; conditional E-value: 8.5e-53
TRAPP14_N 274 mPdGsvllvdnvchqsaevtmasfcrldsessklPsvlsaleeknflfqlqlqekeeedsseGlevplvavlqwstpklpltrlistlyslpsir 368
mPdGsvllvdnvchqs+ev+m+sfcrl+++s+++P+ l alee+nflfql+ +e+ +++++eGlevpl+av+qwstpklp+t++i+t+y+lps+r
NP_001290399.1 1 MPDGSVLLVDNVCHQSGEVSMGSFCRLPGTSGCFPCPLNALEEHNFLFQLRGGEQPPPGAKEGLEVPLIAVVQWSTPKLPFTQSIYTHYRLPSVR 95
9********************************************************************************************** PP
TRAPP14_N 369 ldrpe 373
ldrp+
NP_001290399.1 96 LDRPC 100
****6 PP
== domain 2 score: -2.3 bits; conditional E-value: 0.11
TRAPP14_N 75 aaes.arqqPaeedllssgd 93
++s +qqP+++ l+ sg+
NP_001290399.1 245 RSQSfSHQQPSRSHLMRSGS 264
33333344444443433333 PP
Or compare NP_001290399.1 to CDD or PaperBLAST