NP_001322622.1 has 978 amino acids
Query: DUF4378 [M=166]
Accession: PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-40 125.3 3.3 1.6e-40 125.3 3.3 3.0 3 NP_001322622.1
Domain annotation for each sequence (and alignments):
>> NP_001322622.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 2.2 0.0 0.012 0.012 70 116 .. 82 123 .. 60 162 .. 0.69
2 ? -2.7 0.1 0.37 0.37 90 122 .. 729 761 .. 708 770 .. 0.61
3 ! 125.3 3.3 1.6e-40 1.6e-40 1 166 [] 780 955 .. 780 955 .. 0.81
Alignments for each domain:
== domain 1 score: 2.2 bits; conditional E-value: 0.012
DUF4378 70 iLveilelfkrsfsyppskvssassrrrpkklsgeelleevwseirs 116
L+e+l++ +++ +s+vs +ss+++ ++ ++e+ +ev+ ei+
NP_001322622.1 82 GLSEKLTR---LSTE-CSRVSFSSSCSSS-SPLSSEVNREVQPEISA 123
46777653...3333.3355555555333.37777888888888874 PP
== domain 2 score: -2.7 bits; conditional E-value: 0.37
DUF4378 90 ssassrrrpkklsgeelleevwseirswlspes 122
++++s + +++ ++ + +e++ ++++++ s+ +
NP_001322622.1 729 KTTTSFSPEMNRKKLQNVEHLVQKLKRLNSSHD 761
344455555555566668888888887666653 PP
== domain 3 score: 125.3 bits; conditional E-value: 1.6e-40
DUF4378 1 eleYvrdiLeasglllkd..sdellsrwhssespldpslfeeleekkgsaseeetresrserklLFDlvneiLveilelfkrsfsyppskvssas 93
+++Y+++iL+asglll+d s + h s++p++p+lf +e++kg++s++ +++++rkl+FD+vne+L ++l+ f +s+ +p++k +a+
NP_001322622.1 780 DHRYISEILLASGLLLRDlgSGLTTFQLHPSGHPINPELFLVIEQTKGCSSSS---NEKINRKLVFDAVNEMLGKKLA-FVESYVDPWMK--QAK 868
79****************874445556778888**************975444...59******************99.54555555555..555 PP
DUF4378 94 srrrpkklsgeelleevwseirswlspe..........selvlde...........lvdkdlssregkwldledeveeigleierlIledLveE 166
r +k ls ++ll+e++sei+ + +++ + e ++d+d++ +++kw+d++d +++++l++erl+++dLv+E
NP_001322622.1 869 AR--KKVLSAQNLLKELCSEIEILQKQAkkrsenllllE-----EeeeeeedflkcILDEDMAIQSEKWTDFDDAIPGLVLDMERLLFKDLVKE 955
54..7789**************65555566666444441.....344444578888************************************98 PP
Or compare NP_001322622.1 to CDD or PaperBLAST