NP_001325882.1 has 508 amino acids
Query: DUF4378 [M=166]
Accession: PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-19 55.3 2.8 1.3e-18 54.0 1.5 2.5 2 NP_001325882.1
Domain annotation for each sequence (and alignments):
>> NP_001325882.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.0 0.0 0.22 0.22 9 33 .. 193 216 .. 189 283 .. 0.65
2 ! 54.0 1.5 1.3e-18 1.3e-18 1 166 [] 351 488 .. 351 488 .. 0.72
Alignments for each domain:
== domain 1 score: -2.0 bits; conditional E-value: 0.22
DUF4378 9 Leasglllkdsdellsrwhssespl 33
L++s+l +++ +l+ hs+ +p+
NP_001325882.1 193 LHSSSLKHQS-RNLVFDHHSPIKPV 216
5556654443.33444444443333 PP
== domain 2 score: 54.0 bits; conditional E-value: 1.3e-18
DUF4378 1 eleYvrdiLeasglllkdsdellsrwhssespldpslfeeleekkgsaseeetresrserklLFDlvneiLveilelfkrsfsyppskvssassr 95
e+ Y++diL as l ++s + f le+++ + + +r er+l+FD+v+ei + + + p+++v a
NP_001325882.1 351 EYVYISDILRASDCLPQES----------------DSFSFLEKQQYLKGKCASRAAAQERRLIFDAVQEIVARR------RSLPPWMMVGEAD-- 421
578**********986663................23333433332222223468899****************......3456665544443.. PP
DUF4378 96 rrpkklsgeelleevwseirswlspeselvlde.......lvdkdlssregkwldledeveeigleierlIledLveE 166
+ + +wse +++++++s+ d+ ++ +dls++ +w d+++e+ e++l++erlI++dL+ E
NP_001325882.1 422 ---------NKMQVIWSEFQKIRDKKSSTEEDDlvgyvcgVLGRDLSED--RWRDFQVEMSEAVLDVERLIFKDLIGE 488
.........3456777777775555533333337777999*******77..*************************98 PP
Or compare NP_001325882.1 to CDD or PaperBLAST