NP_001326116.1 has 2130 amino acids
Query: DUF2428 [M=259]
Accession: PF10350.13
Description: THADA/TRM732, DUF2428
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-75 239.3 0.1 4.6e-75 238.3 0.1 1.6 1 NP_001326116.1
Domain annotation for each sequence (and alignments):
>> NP_001326116.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 238.3 0.1 4.6e-75 4.6e-75 3 259 .] 992 1311 .. 990 1311 .. 0.90
Alignments for each domain:
== domain 1 score: 238.3 bits; conditional E-value: 4.6e-75
DUF2428 3 lerllelceriwsvvlpvlsddspeghlpedledeeee.sk.se.............eeeeee..........ltaqvvlscsWralkeasll 70
le+ll+l+ ri+ ++l+v+s+d+ lped++d ++ s s+ + +++qvv++ +W+a+ke+sll
NP_001326116.1 992 LEKLLKLVTRITTLALWVVSADALC--LPEDMDDIIDDdSFfSNvqddsaavlseehT----StypkhvhetvQSEQVVMVGCWLAMKEVSLL 1078
689****************999987..8999998887755555466666555443220....13445555667889***************** PP
DUF2428 71 lgtivekvpletekskeds...................llskeqlekigelffeqLlelrHrGAfetvyvgftalcqrllrskdselsqlpeq 144
lgti++k+pl+t++ + + ll+ +qlekig++f+e+Ll+++H+GA++++++gftalc+rll+s+d++l++l+e+
NP_001326116.1 1079 LGTIIRKIPLPTSSLRPLEngdtassvpndlvignsesLLDLKQLEKIGDHFLEVLLKMKHNGAIDKTRAGFTALCHRLLCSNDPRLCKLTES 1171
***********998765558999********************************************************************** PP
DUF2428 145 wleelleeik...skslsitRRSAGlPflilailssepksskkklLkkamkeLleiakkpa......................eseeesesee 212
w+e+l+e+ +++++++RRSAG+P++++a++ sep++s kklL +a+++L+ +a+kp+ ++e+ s+ ++
NP_001326116.1 1172 WMEQLMERTVakgQTVDDVLRRSAGIPAAFIALFLSEPEGSPKKLLPRALRWLIGLAEKPLmepleqkgskhmveeinssdmhSNEKLSKVRD 1264
*******9999*****************************99******************9************99999887765555566669 PP
DUF2428 213 ksdlpqvhalNiLraifrdskLgeevspyvaeglelaiegfsspvWa 259
+ +p+vha+N+L+a f+d++L++++s + ae+++++i++fssp+W+
NP_001326116.1 1265 EGVVPTVHAFNVLKATFNDTNLSTDTSGFSAEAMIVSIRSFSSPYWE 1311
9*********************************************6 PP
Or compare NP_001326116.1 to CDD or PaperBLAST