PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001327750.1 to PF03478 (Beta-prop_KIB1-4)

NP_001327750.1 has 203 amino acids

Query:       Beta-prop_KIB1-4  [M=242]
Accession:   PF03478.24
Description: KIB1-4 beta-propeller
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-21   62.5   0.0    3.5e-21   61.9   0.0    1.3  1  NP_001327750.1  


Domain annotation for each sequence (and alignments):
>> NP_001327750.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.9   0.0   3.5e-21   3.5e-21       7      96 ..      83     200 ..      72     203 .] 0.86

  Alignments for each domain:
  == domain 1  score: 61.9 bits;  conditional E-value: 3.5e-21
  Beta-prop_KIB1-4   7 kkly.rlrlpeelrgsrcvgssggWLllvdssselfLlnpltgarieLPpletlp...............................arevvir 67 
                        k+y  ++l  +l +src+++sg+WLll+d++++++Lln++t++ri LP+le++                                  ++ i+
    NP_001327750.1  83 AKTYvITDLGFDLPRSRCLATSGSWLLLLDHRTDFYLLNLFTRERICLPTLEAIDgwqmkfervgesdflktftyregytsyssriSTKIRIE 175
                       566634444448999***************99*****************998766999***********************999987788889 PP

  Beta-prop_KIB1-4  68 kvvLsadpskssdyvvlvihssaggklaf 96 
                       k+vL++d+ +s+dy+v++  +s    +a+
    NP_001327750.1 176 KAVLWVDE-RSRDYLVVWNLESF---FAY 200
                       ********.*******9987664...555 PP



Or compare NP_001327750.1 to CDD or PaperBLAST