NP_001328316.1 has 208 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8e-15 41.2 0.2 2.8e-14 39.4 0.2 2.0 1 NP_001328316.1
Domain annotation for each sequence (and alignments):
>> NP_001328316.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.4 0.2 2.8e-14 2.8e-14 75 151 .. 70 142 .. 26 179 .. 0.76
Alignments for each domain:
== domain 1 score: 39.4 bits; conditional E-value: 2.8e-14
UPF0020 75 aelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflre 151
+ ++++g+D+d++ +++a Nae+ +v +i+f+q d++kL+lk vd++v npP+G r + +a ++ s+ ++
NP_001328316.1 70 DAASVIGFDIDPESLETATLNAEELEV--EIDFVQCDITKLELKGLIVDTVVMNPPFGTRKK--GADMEFLSAAMKV 142
556689*****************8765..7************7777************9954..4444444444444 PP
Or compare NP_001328316.1 to CDD or PaperBLAST