NP_001331736.1 has 662 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-25 74.1 0.0 3.5e-14 38.8 0.0 2.3 2 NP_001331736.1
Domain annotation for each sequence (and alignments):
>> NP_001331736.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 33.0 0.0 2.1e-12 2.1e-12 20 108 .. 105 195 .. 89 205 .. 0.84
2 ! 38.8 0.0 3.5e-14 3.5e-14 3 113 .. 403 511 .. 401 550 .. 0.87
Alignments for each domain:
== domain 1 score: 33.0 bits; conditional E-value: 2.1e-12
PDH_N 20 deekakaalelglvdeatddieavkea.divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.gksfvgghPmaGte 108
+++aa++lg+ + + + + d+vll++ + i+++lk l l+++ l +Dv svKe l + l+ + +hPm+G++
NP_001331736.1 105 RSDHSSAARRLGVSYFTDL-HDLCERHpDVVLLCTSILSIENILKTLPFqRLRRNTLFVDVLSVKEFAKTLLLQYLPeDFDILCTHPMFGPQ 195
445778889****998877.46665556******************97658**************************999**********94 PP
== domain 2 score: 38.8 bits; conditional E-value: 3.5e-14
PDH_N 3 ralrrkgfkvtvigydideekakaalelglvdeatddieavkea.divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk. 94
+ + ++g +tv y++++ + +aa +lg+ + + d + +e ++++l++ + +++vl+ l lk++ l +Dv svKe + + + l+
NP_001331736.1 403 KTMVKQG--HTVLAYSRSDYTDEAA-KLGVSYFSDLD-DLFEEHpEVIILCTSILSTEKVLESLPFqRLKRSTLFVDVLSVKEFPRNLFLQTLPq 493
5566777..9**********99999.*****999987.7777767******************97658**************************9 PP
PDH_N 95 gksfvgghPmaGteksGvd 113
+ +hPm+G+ +sG +
NP_001331736.1 494 DFDILCTHPMFGP-ESGKN 511
99***********.66654 PP
Or compare NP_001331736.1 to CDD or PaperBLAST