NP_004970.3 has 647 amino acids
Query: DUF3399 [M=76]
Accession: PF11879.12
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-35 107.3 3.0 5.2e-35 106.1 3.0 1.7 1 NP_004970.3
Domain annotation for each sequence (and alignments):
>> NP_004970.3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.1 3.0 5.2e-35 5.2e-35 2 75 .. 471 549 .. 470 550 .. 0.96
Alignments for each domain:
== domain 1 score: 106.1 bits; conditional E-value: 5.2e-35
DUF3399 2 tsllEsQHHHLLhCLEKTTnheFvdEqtyeenclevslqkrpsrspslssq....egltssCCsrrakr.sirlpnssl 75
+s++E+QHHHLLhCLEKTT+heF+dE t++e++ +vs r+srs+s+ssq +l ssCC+rrakr +irl+ns++
NP_004970.3 471 RSAFEQQHHHLLHCLEKTTCHEFTDELTFSEALGAVSPGGRTSRSTSVSSQpvgpGSLLSSCCPRRAKRrAIRLANSTA 549
79**************************************************99999***********77*******86 PP
Or compare NP_004970.3 to CDD or PaperBLAST