NP_004971.2 has 655 amino acids
Query: DUF3399 [M=76]
Accession: PF11879.12
Description: Domain of unknown function (DUF3399)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-40 121.9 7.0 1.6e-39 120.6 7.0 1.8 1 NP_004971.2
Domain annotation for each sequence (and alignments):
>> NP_004971.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 120.6 7.0 1.6e-39 1.6e-39 2 75 .. 469 562 .. 468 563 .. 0.98
Alignments for each domain:
== domain 1 score: 120.6 bits; conditional E-value: 1.6e-39
DUF3399 2 tsllEsQHHHLLhCLEKTT...................nheFvdEqtyeenclevslqkrps.rspslssqegltssCCsrrakrsirlpnssl 75
tsl+EsQHHHLLhCLEKTT nheF+dEq++e+nc+e+s+q++ps rspslss+ glt++CCsrr+k++++lpns+l
NP_004971.2 469 TSLIESQHHHLLHCLEKTTglsylvddpllsvrtstikNHEFIDEQMFEQNCMESSMQNYPStRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNL 562
79******************************************************************************************96 PP
Or compare NP_004971.2 to CDD or PaperBLAST