PaperBLAST – Find papers about a protein or its homologs

 

Align NP_011371.1 to PF05057 (DUF676)

NP_011371.1 has 685 amino acids

Query:       DUF676  [M=217]
Accession:   PF05057.18
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-72  229.6   0.0    2.4e-72  229.0   0.0    1.2  1  NP_011371.1  


Domain annotation for each sequence (and alignments):
>> NP_011371.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  229.0   0.0   2.4e-72   2.4e-72       2     212 ..     185     379 ..     184     384 .. 0.97

  Alignments for each domain:
  == domain 1  score: 229.0 bits;  conditional E-value: 2.4e-72
       DUF676   2 skkdhLvVlvHGlegn.sadleyvkeqlek.keklpdelivvlmsennesktfkgidvlgerlaeevlevvkkkkdkikkiSfvghSlGgliaryaig 97 
                  +kk+hLvVl+HGl++n s+dl y++eq++k ++++p+e+ivv+++++n ++t+kg+++lg+rlae++++ +++++ +  kiSfvghSlGgli+++ai+
  NP_011371.1 185 QKKKHLVVLTHGLHSNvSTDLVYIMEQIYKaQKNYPHEQIVVKGYRGNVCQTEKGVKYLGTRLAEYIIQDLYDESIR--KISFVGHSLGGLIQAFAIA 280
                  6899***********************************************************************99..******************* PP

       DUF676  98 klkekkmtlkglikglepvtFitlasPhLGvlgekplinlglalleklkkslsmkqlgktGreLflkdekdkkkslllkllkdesdlkliealkaFkr 195
                  +++e    +++++k+++p++FitlasP+LG+++++p+         ++k+ ls++++gktG++L l+++++  k+ll+ l    s l+lie l++Fkr
  NP_011371.1 281 YIYEV---YPWFFKKVNPINFITLASPLLGIVTDNPA---------YIKVLLSFGVIGKTGQDLGLENDVEVGKPLLYLL----SGLPLIEILRRFKR 362
                  ***66...589**************************.........**********************************....8899********** PP

       DUF676 196 rvlyanvvndrivplks 212
                  r++yan++nd+ivpl++
  NP_011371.1 363 RTVYANAINDGIVPLYT 379
                  ****************9 PP



Or compare NP_011371.1 to CDD or PaperBLAST