NP_011665.1 has 432 amino acids
Query: DUF2838 [M=111]
Accession: PF10998.12
Description: Protein of unknown function (DUF2838)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-46 143.7 18.1 1.3e-46 143.7 18.1 2.7 3 NP_011665.1
Domain annotation for each sequence (and alignments):
>> NP_011665.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.7 18.1 1.3e-46 1.3e-46 1 111 [] 112 222 .. 112 222 .. 0.99
2 ? -1.7 0.1 0.18 0.18 78 98 .. 265 285 .. 257 298 .. 0.51
3 ? -1.4 2.5 0.15 0.15 25 53 .. 340 368 .. 300 373 .. 0.60
Alignments for each domain:
== domain 1 score: 143.7 bits; conditional E-value: 1.3e-46
DUF2838 1 dklsFvlgvlnvlltalllgkapellplvytvlllvllplryvtyrkkklhYfllDlCYfvnllllllllvlpeskelfkavfvlanGplalAiitwr 98
+k ++ ++++n++++++l+g++pe+++++yt+l++vl+p+r++ty+k+k hYfl+D+CYfvn+l+ll+++++p s +lf+++f++++G+l +A+itwr
NP_011665.1 112 EKAFYPFTLFNIFFIGFLMGRFPEWFHVYYTILFFVLMPIRFYTYYKTKNHYFLADFCYFVNMLCLLFIWIFPYSYSLFQSCFAFTFGTLCFAVITWR 209
7999********************************************************************************************** PP
DUF2838 99 nslvfhsldkvtS 111
nslv+hs+dk+tS
NP_011665.1 210 NSLVIHSIDKTTS 222
************8 PP
== domain 2 score: -1.7 bits; conditional E-value: 0.18
DUF2838 78 lfkavfvlanGplalAiitwr 98
l ++++ l +l it++
NP_011665.1 265 LWTSLYYLVWQSLYHYFITLK 285
444444444444444444444 PP
== domain 3 score: -1.4 bits; conditional E-value: 0.15
DUF2838 25 llplvytvlllvllplryvtyrkkklhYf 53
+++ y ++++++l++ ++ +++ Y+
NP_011665.1 340 GIWIRYKLAAALFLTIVFLWASHNGATYY 368
34555555555555555555555555555 PP
Or compare NP_011665.1 to CDD or PaperBLAST