NP_014517.1 has 433 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-15 43.8 0.0 1.7e-14 40.1 0.0 2.2 1 NP_014517.1
Domain annotation for each sequence (and alignments):
>> NP_014517.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.1 0.0 1.7e-14 1.7e-14 3 134 .. 184 297 .. 183 303 .. 0.79
Alignments for each domain:
== domain 1 score: 40.1 bits; conditional E-value: 1.7e-14
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvq..gareNaek 98
+R+++g ++ ++L+ + ++a++k+g+ ++DP+ G+G++l+ ++ g+ ++ gsD+d r+++ ga+ N ++
NP_014517.1 184 KRPYKGTTSFEAELSLVSANIAQVKPGTIMYDPFAGTGSFLVAGGHFGSLVI--------------------------GSDIDGRMIRgkGAQVNISA 255
79***********************************************999..........................*********73369988654 PP
UPF0020 99 a..gvg...dliefsqadaakLr.lkegevdvivtnpPYGer 134
+ g ++ ++ ++d+++ +++ +d+i+++pPYG+r
NP_014517.1 256 NfkKYGessQFLDVLTMDFTNNAlRNNLVIDTILCDPPYGIR 297
311333001444555555554333366699**********99 PP
Or compare NP_014517.1 to CDD or PaperBLAST