NP_035756.2 has 323 amino acids
Query: UPF0016 [M=75]
Accession: PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-50 154.9 19.6 1e-29 89.0 3.6 2.2 2 NP_035756.2
Domain annotation for each sequence (and alignments):
>> NP_035756.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 71.8 8.2 2.5e-24 2.5e-24 2 75 .] 99 171 .. 98 171 .. 0.97
2 ! 89.0 3.6 1e-29 1e-29 2 75 .] 238 311 .. 237 311 .. 0.98
Alignments for each domain:
== domain 1 score: 71.8 bits; conditional E-value: 2.5e-24
UPF0016 2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
+++++i+++ElGDkT+++++++A+ry+ l+V++Ga+lAlal+t l+vl+G + + +p+ ++ +v+ +lF++fG
NP_035756.2 99 AAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGYAT-TVIPRVYTYYVSTALFAIFG 171
7899**********************************************887.99*****************9 PP
== domain 2 score: 89.0 bits; conditional E-value: 1e-29
UPF0016 2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
++++l+flaE+GD++ql+ti+LAar++p++V +G t++++l+t+lav++G+++a++++ r+v+++++++Fl+f+
NP_035756.2 238 QALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 311
899*********************************************************************97 PP
Or compare NP_035756.2 to CDD or PaperBLAST