NP_049514.1 has 404 amino acids
Query: DUF4043 [M=376]
Accession: PF13252.11
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-93 297.7 1.1 6.8e-93 297.6 1.1 1.0 1 NP_049514.1
Domain annotation for each sequence (and alignments):
>> NP_049514.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 297.6 1.1 6.8e-93 6.8e-93 2 375 .. 2 403 .. 1 404 [] 0.95
Alignments for each domain:
== domain 1 score: 297.6 bits; conditional E-value: 6.8e-93
DUF4043 2 tavgsalavkkqraglfaetlkrttalprl..................qtstnmpivrvndlqksaGdevtfdLvnklagapitgnevaegrgealsl 81
t+v sa+a k+++++lf ++ ++ + ++ l qts+ p+vr++dl+k+aGdevtf +++kl+ p +g+e egrge ls
NP_049514.1 2 TTVTSAQANKLYQVALFTAANRNRSMVNILteqqeapkavspdkkstkQTSAGAPVVRITDLNKQAGDEVTFSIMHKLSKRPTMGDERVEGRGEDLSH 99
799*********************************************************************************************** PP
DUF4043 82 ssdelrinelrkavdaggtmdqqrspvdlralaraalkdyldkledqealvkmagarafssa...........kfnatvvnavkApssnrhfvaagaa 168
l+in+ r+ vdagg m+qqr++++l + ar l y++ l+dq a+v++agar+ a +f +++n v p+ +rhf+++ a
NP_049514.1 100 ADFSLKINQGRHLVDAGGRMSQQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFVAddtilptaehpEFKKIMINDVLPPTHDRHFFGGDAT 197
**********************************************************88778889***************************88777 PP
DUF4043 169 ltsvgqatgklastdlltldlldalrkvvdamalplrpvklegdkaaqddelyVlllhPaqysdlrad...gklrqlqknAiaratvdknPlFkgeag 263
++++ d++ ++l+d+l +d+ma+pl+pv+l gd+ ++d++yVl+++P q +d ++ + q+ A++ra+ ++PlFkge
NP_049514.1 198 SFE------QIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGEDPYYVLYVTPRQWNDWYTStsgKDWNQMMVRAVNRAKGFNHPLFKGECA 289
666......8********************************************************9977668999999******************* PP
DUF4043 264 lyngvllikip.rairfvnadsgkiaaatfs......aasyavdrslllGaQAlakafgkkkngaipfiwseklldhgsrlevlaetidGlaktrfnv 354
++ +l++k +irf+++++ + ++ + aa +dr++llGaQAla+a+g+k ++ f + ek +d +r e+ + +i+Gl+k+rf
NP_049514.1 290 MWRNILVRKYAgMPIRFYQGSKVLVSENNLTattkevAAATNIDRAMLLGAQALANAYGQK--AGGHFNMVEKKTDMDNRTEIAISWINGLKKIRFPE 385
*********76268******99977776666788888***********************9..78889999999**********************99 PP
DUF4043 355 ddGggakptdfgviavdtava 375
+ +k +d+gviavdtav+
NP_049514.1 386 K---SGKMQDHGVIAVDTAVK 403
9...56899**********98 PP
Or compare NP_049514.1 to CDD or PaperBLAST