NP_050633.1 has 512 amino acids
Query: DUF935 [M=517]
Accession: PF06074.16
Description: Protein of unknown function (DUF935)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-188 613.4 0.0 2.1e-188 613.3 0.0 1.0 1 NP_050633.1
Domain annotation for each sequence (and alignments):
>> NP_050633.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 613.3 0.0 2.1e-188 2.1e-188 1 516 [. 3 506 .. 3 507 .. 0.97
Alignments for each domain:
== domain 1 score: 613.3 bits; conditional E-value: 2.1e-188
DUF935 1 eildasgrpikeekaaleeqtaeatltgvrrelsehpssgLtparlarilreaeqGdilaqleLaedmEekdahlaselstRkravlgldwevepasd 98
+ild+sg+p+++++ e+q ++ +l++v+++++ehpssg+tp+r+a++lr+ae+Gd++aq++La dmEekd+hl+sels+R+ a+++l+w+++pa+d
NP_050633.1 3 RILDISGQPFDFDD---EMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSKRRLAIQALEWRIAPARD 97
599********998...7888888************************************************************************** PP
DUF935 99 .daaeekladavrelledldnledllfdllDAigkGfsvlEieWetsggewvpkalewrdprwfqfdredrnelrlrdateegeelppfkfvvhrhka 195
+a+e+k+ad+++e+l+d+ ++ed+lfd+ DAi+kG+s++EieW++ g++ vp+al++rdp+ f+ ++++ nelrlrda+ +g el+pf++ +hr+k+
NP_050633.1 98 aSAQEKKDADMLNEYLHDAAWFEDALFDAGDAILKGYSMQEIEWGWLGKMRVPVALHHRDPALFCANPDNLNELRLRDASYHGLELQPFGWFMHRAKS 195
************************************************************************************************** PP
DUF935 196 ksglpiragllrvlaWpylfknyslkdwaeFlEvYGlPlrlGkYpagAseeeketLlravasigsdAaaiiPesmeiefkeaakagssdlfealaewc 293
++g++ +gl+r+l+Wp++fknys++d+aeFlE+YGlP+r+GkYp+g++++ek+tL++av++ig+ A++iiP +m+++f++aa+ g+sd+f+a++ w+
NP_050633.1 196 RTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEIYGLPMRVGKYPTGSTNREKATLMQAVMDIGRRAGGIIPMGMTLDFQSAAD-GQSDPFMAMIGWA 292
************************************************************************************.************* PP
DUF935 294 dkqiSkaiLGqTlTtdadg.gssnAlgkvhneVreDirdaDakqlaatlnrdlirplvalNfgs...qerlPrfefdveepeDlkalaealekLvklG 387
+k iSkaiLG+TlTt+a g +++++lg+vh+eVr++ir+aD+ qla+++nrdli+pl+alN +s +rlP + fd++e+ D++al++a++kL+ G
NP_050633.1 293 EKAISKAILGGTLTTEA-GdKGARSLGEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDStidINRLPGIVFDTSEAGDITALSDAIPKLAA-G 388
*****************.6699******************************************9999**************************97.* PP
DUF935 388 lrvpasevrdklglpepekdeevlkaaaaaepeaaaapaalaaaaalaaqaaaeaaeqdalDaladealaesqaalepllapvlellqkaesleella 485
+r+p+s++++kl++p+p +de+v + + +++ +++ aa +a++ +++d++D++ + + ++q++++pll+pv+ + k + +e++++
NP_050633.1 389 MRIPVSWIQEKLHIPQPVGDEAVFTIQPVVPDNGSQKE---------AALSAEDIPQEDDIDRMGVSPE-DWQRSVDPLLKPVIFSVLK-DGPEAAMN 475
*************************5444444444444.........557899***********99996.78************99999.9******* PP
DUF935 486 rlaelypemdaeelaelLaralfvAdllGrl 516
+ a+lyp+md++el ++L+ra+fvAd++Grl
NP_050633.1 476 KAASLYPQMDDAELIDMLTRAIFVADIWGRL 506
*****************************97 PP
Or compare NP_050633.1 to CDD or PaperBLAST