NP_060909.2 has 320 amino acids
Query: UPF0029 [M=107]
Accession: PF01205.25
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-36 109.5 0.0 6.2e-36 109.0 0.0 1.3 1 NP_060909.2
Domain annotation for each sequence (and alignments):
>> NP_060909.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.0 0.0 6.2e-36 6.2e-36 1 107 [] 182 289 .. 182 289 .. 0.92
Alignments for each domain:
== domain 1 score: 109.0 bits; conditional E-value: 6.2e-36
TTEEEEEEEEE-SSHHHHHHHHHHH--..TT..SSEEEEEEE....ETT.E.EEEE-TTSSTTSSHHHHHHHHHHTTB-SEEEEEEEE--SS--HHHH CS
UPF0029 1 kkSkFiahaapveseeeakelleelkkehkk..AtHnvyAyrie.eeed.eierssDdgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagg 94
++S+F+ah+apv ++++k +l++l +++k AtHn+yAyri e+++ ++++DdgE++ AG ++l+++e +++nv+vvv+R++GGi+LG+++
NP_060909.2 182 RRSTFQAHLAPVVCPKQVKMVLSKLYENKKIasATHNIYAYRIYcEDKQtFLQDCEDDGETA--AGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDR 277
79*********************9998666578**********8633344789*********..********************************** PP
HHHHHHHHHHHHH CS
UPF0029 95 lvrayskaakeal 107
+ ++++++a+++l
NP_060909.2 278 F-KHINNCARNIL 289
*.*******9976 PP
Or compare NP_060909.2 to CDD or PaperBLAST