NP_060945.2 has 324 amino acids
Query: UPF0016 [M=75]
Accession: PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-50 153.9 19.1 1e-29 89.0 3.6 2.2 2 NP_060945.2
Domain annotation for each sequence (and alignments):
>> NP_060945.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 70.9 7.7 4.8e-24 4.8e-24 2 75 .] 99 171 .. 98 171 .. 0.97
2 ! 89.0 3.6 1e-29 1e-29 2 75 .] 239 312 .. 238 312 .. 0.98
Alignments for each domain:
== domain 1 score: 70.9 bits; conditional E-value: 4.8e-24
UPF0016 2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
+++++i+++ElGDkT+++++++A+ry+ l+V++Ga+lAl l+t l+vl+G + + +p+ ++ +v+ vlF++fG
NP_060945.2 99 AAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYAT-TVIPRVYTYYVSTVLFAIFG 171
7899**********************************************887.99*****************9 PP
== domain 2 score: 89.0 bits; conditional E-value: 1e-29
UPF0016 2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
++++l+flaE+GD++ql+ti+LAar++p++V +G t++++l+t+lav++G+++a++++ r+v+++++++Fl+f+
NP_060945.2 239 QALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 312
899*********************************************************************97 PP
Or compare NP_060945.2 to CDD or PaperBLAST