PaperBLAST – Find papers about a protein or its homologs

 

Align NP_061949.3 to PF06722 (EryCIII-like_C)

NP_061949.3 has 530 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.6e-20   58.2   0.0    1.2e-19   56.8   0.0    1.7  1  NP_061949.3  


Domain annotation for each sequence (and alignments):
>> NP_061949.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   1.2e-19   1.2e-19      27     133 ..     340     448 ..     319     456 .. 0.91

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 1.2e-19
  EryCIII-like_C  27 relpdnvRlvdfvPlgvll..ptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsdsiakavaevvedpayr 119
                     ++l +n  lv ++P ++ll  p + a++ h+G+  +  ++  GvP v++p + d++ +a+r+   Gag++l++ e+ts+ +++a++ v++d++y+
     NP_061949.3 340 SNLANNTILVKWLPQNDLLghPMTRAFITHAGSHGVYESICNGVPMVMMPLFGDQMDNAKRMETKGAGVTLNVLEMTSEDLENALKAVINDKSYK 434
                     678899999*********9667899********************************************************************** PP

  EryCIII-like_C 120 aaaaklaeeiaaeP 133
                     ++  +l +   ++P
     NP_061949.3 435 ENIMRLSSLHKDRP 448
                     **999877655555 PP



Or compare NP_061949.3 to CDD or PaperBLAST