NP_082477.1 has 343 amino acids
Query: UPF0492 [M=359]
Accession: PF15744.9
Description: Uncharacterized protein family UPF0492
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-127 409.7 6.3 1.9e-110 355.4 4.2 2.2 2 NP_082477.1
Domain annotation for each sequence (and alignments):
>> NP_082477.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.7 0.0 4.7e-19 4.7e-19 1 34 [. 10 42 .. 10 63 .. 0.86
2 ! 355.4 4.2 1.9e-110 1.9e-110 126 359 .] 65 295 .. 45 295 .. 0.98
Alignments for each domain:
== domain 1 score: 54.7 bits; conditional E-value: 4.7e-19
UPF0492 1 CGnfavLvDLhilpqgsnkdtsWfseqkkeevcl 34
CGnfavLvDLh+lpqgsn+d+sWfseqkke v
NP_082477.1 10 CGNFAVLVDLHVLPQGSNRDSSWFSEQKKE-VMA 42
***************************985.544 PP
== domain 2 score: 355.4 bits; conditional E-value: 1.9e-110
UPF0492 126 ltervlhsvsdYfaecaesplqpsaklkRnvlkeivkrtktkssrvsksqeskdtvekssdsvlteiarrrniqqasssslsessGqakdyikaaekh 223
lt+++lh+vsdYf+ecaes+++p++klkRn+lkeiv+rtk+k+++vsk+q+s d+v++ssdsv+t +++rr +as++ lses+Gqa+d+i+aa++h
NP_082477.1 65 LTKKALHGVSDYFPECAESSPSPGTKLKRNALKEIVRRTKSKGTDVSKPQPSGDLVGRSSDSVITVVPWRR---DASAILLSESVGQAQDDIRAAKSH 159
89********************************************************************8...9*********************** PP
UPF0492 224 sglpvqklervnqtqPedtssqqkskpGevlktglesrspvvshesaspgpkqspraaktqqkkrnqssaedfdkrkRvslgddelvpreiivekeka 321
++lpvqkle+v+qtqP+dt+sqq+++pGe+lktgl+srsp++++esaspgpkqs+raaktqqk+rn++s+ed+d+r+Rvslg++ lvp+++++e+++a
NP_082477.1 160 QELPVQKLENVSQTQPGDTRSQQQLHPGEWLKTGLLSRSPAYNYESASPGPKQSLRAAKTQQKHRNCGSVEDCDHRRRVSLGNEGLVPEDADRERSTA 257
************************************************************************************************** PP
UPF0492 322 vavLPalelsdpglLlkqdLaktkskeelkvlenlssR 359
v+vLPalelsdpglLlkqdLak+k+keel++lenlssR
NP_082477.1 258 VRVLPALELSDPGLLLKQDLAKAKAKEELHALENLSSR 295
************************************98 PP
Or compare NP_082477.1 to CDD or PaperBLAST