NP_083556.2 has 209 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.9e-11 28.3 0.4 6.5e-10 25.1 0.4 2.1 1 NP_083556.2
Domain annotation for each sequence (and alignments):
>> NP_083556.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.1 0.4 6.5e-10 6.5e-10 13 148 .. 32 146 .. 25 171 .. 0.79
Alignments for each domain:
== domain 1 score: 25.1 bits; conditional E-value: 6.5e-10
UPF0020 13 ketLAaalvrlagwk....dgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlie 106
++ +Aa++++ + +++ +D CG G + I aa+lga +g+D+d+ +++ ++N e+ ++++ ++
NP_083556.2 32 RPHIAACMLYTIHNTyddiENKAVADLGCGCGVLSIGAAMLGAGLC-------------------------VGFDIDEDALEIFNKNVEEFELTN-VD 103
6677777776555441111445688888999999999999999888.........................8********************986.78 PP
UPF0020 107 fsqadaakLr.lkegevdvivtnpPYGerlgskkalekLYsef 148
+ q d+ +L ++++ +d+++ npP+G + ++ ++ L ++
NP_083556.2 104 MIQCDVYSLSnRMSKLFDTVIMNPPFGTKNNKGTDMAFLKTAL 146
8888******888889***********9988777766666555 PP
Or compare NP_083556.2 to CDD or PaperBLAST