Align NP_110491.2 to PF02965 (Met_synt_B12)

NP_110491.2 has 1253 amino acids

Query:       Met_synt_B12  [M=273]
Accession:   PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.8e-118  381.0   0.0   3.1e-118  380.2   0.0    1.4  1  NP_110491.2  


Domain annotation for each sequence (and alignments):
>> NP_110491.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  380.2   0.0  3.1e-118  3.1e-118       2     273 .]     954    1234 ..     953    1234 .. 0.97

  Alignments for each domain:
  == domain 1  score: 380.2 bits;  conditional E-value: 3.1e-118
  Met_synt_B12    2 leelveyidWtpffqawelkgky.....pkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyades...rseela 88  
                    l++lv+yidW+pff++w+l+gky     pki++d++vgeea+k+++dAq+mL+ +i++k+l+a++vvg++pa+sv+ddi++ya+ +    +e +a
   NP_110491.2  954 LQKLVDYIDWKPFFDVWQLRGKYpnrgfPKIFNDKAVGEEARKVYEDAQNMLNILISRKKLRARGVVGFWPAQSVQDDIHLYAEGAvpqAAEPIA 1048
                    89*********************99999******************************************************887755567799* PP

  Met_synt_B12   89 tlhtLrqqaeke..egepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyak 181 
                    t++ Lrqqaek+  +++p+ cl+Dfvap +sgv+Dy+Glfav++ +g+eel k++e++ DdYs+i+vkal DrLaeAfae lhe+vr+elW y  
   NP_110491.2 1049 TFYGLRQQAEKDssSTDPYHCLSDFVAPLHSGVRDYLGLFAVAC-FGVEELSKAYEDDGDDYSSIMVKALGDRLAEAFAEELHERVRRELWAYCG 1142
                    **********997678899*************************.************************************************** PP

  Met_synt_B12  182 deklsneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273 
                     e+l +++l k +Y+GiRpApGYp++pdh+ek t+++l ++e+++gi+Lteslam Pa++vsGlyf++ +skyFavgki+kdq+edya rk+
   NP_110491.2 1143 SEQLGVTDLRKLRYEGIRPAPGYPSQPDHTEKLTMWRLANIEQATGIRLTESLAMAPASAVSGLYFSNVKSKYFAVGKISKDQIEDYALRKN 1234
                    ******************************************************************************************96 PP

Or compare NP_110491.2 to CDD or PaperBLAST