NP_250534.1 has 1234 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-130 419.1 0.0 7e-130 418.4 0.0 1.4 1 NP_250534.1
Domain annotation for each sequence (and alignments):
>> NP_250534.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 418.4 0.0 7e-130 7e-130 1 273 [] 945 1216 .. 945 1216 .. 0.98
Alignments for each domain:
== domain 1 score: 418.4 bits; conditional E-value: 7e-130
Met_synt_B12 1 dleelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansv.gddievyadesrseelatlhtLr 94
dl+ l+eyidWtpff +w+l+gkyp+il+de+vge+a++lf+dAqamLkk+i+ekl+ka+av+g++pan+v +dd+evy + e+latlh+Lr
NP_250534.1 945 DLAVLAEYIDWTPFFISWDLAGKYPRILTDEVVGEAATSLFNDAQAMLKKLIDEKLIKARAVFGFWPANQVeHDDLEVYGADG--ETLATLHHLR 1037
57889*****************************************************************956*****95555..679******* PP
Met_synt_B12 95 qqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsnee 189
qq+ k++g+pnl+laDfvapkesgv+DyiG+f++tag+g+ee+ak++ea+ DdY++i+vkalaDrLaeA+ae+lhe+vrke+Wgya+de+l+ne+
NP_250534.1 1038 QQTIKPDGKPNLSLADFVAPKESGVRDYIGGFITTAGIGAEEVAKAYEAKGDDYNSIMVKALADRLAEACAEWLHERVRKEYWGYARDEHLDNEA 1132
*********************************************************************************************** PP
Met_synt_B12 190 likekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
like+Y GiRpApGYpacpdh+ek tlfelld + g++Lte++am Paa+vsG+yfahp+++yFavgki+kdqve y +rkg
NP_250534.1 1133 LIKEQYVGIRPAPGYPACPDHTEKGTLFELLDPQGLSGVSLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKIDKDQVERYSQRKG 1216
**********************************************************************************97 PP
Or compare NP_250534.1 to CDD or PaperBLAST