NP_415835.1 has 301 amino acids
Query: DUF481 [M=210]
Accession: PF04338.18
Description: Protein of unknown function, DUF481
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-12 33.6 1.1 2.1e-12 33.6 1.1 2.0 3 NP_415835.1
Domain annotation for each sequence (and alignments):
>> NP_415835.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.9 0.0 0.66 0.66 28 40 .. 25 37 .. 20 45 .. 0.52
2 ! 33.6 1.1 2.1e-12 2.1e-12 93 197 .. 95 206 .. 94 212 .. 0.85
3 ? -1.4 0.1 0.11 0.11 104 135 .. 269 299 .. 257 301 .] 0.55
Alignments for each domain:
== domain 1 score: -3.9 bits; conditional E-value: 0.66
DUF481 28 grwrhelkakyny 40
++w++++ a y+
NP_415835.1 25 NDWHFNIGAMYEI 37
4444444444443 PP
== domain 2 score: 33.6 bits; conditional E-value: 2.1e-12
DUF481 93 GyqlidtdktklsleaGpgyryekfedgpedetevaarasldy..eykisdnlkftqelevlv.....sleggsnttlrsetgltakltdalslkisy 183
yq++++d+ ++ l +G +++ d+p ++t + r++++ + k++d+l+f+ +l++++ + +g ++t++++etgl++ +++ ++l+++y
NP_415835.1 95 HYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPdwDVKLTDDLRFNGWLSMYKfandlNTTGYADTRVETETGLQYTFNETVALRVNY 192
59****************999999****99999999999986522779*************8633333667889999********************* PP
DUF481 184 evdydskppegkkk 197
++ ++++++++
NP_415835.1 193 YLERGFNMDDSRNN 206
99887777776655 PP
== domain 3 score: -1.4 bits; conditional E-value: 0.11
DUF481 104 lsleaGpgyryekfedgpedetevaarasldy 135
ls+ + +++++++ ++g +++++ a ++++y
NP_415835.1 269 LSVSLEYAFEWQDHDEG-DSDKFHYAGVGVNY 299
45555555555555555.55555555555554 PP
Or compare NP_415835.1 to CDD or PaperBLAST