NP_416835.2 has 273 amino acids
Query: DUF2544 [M=246]
Accession: PF11245.12
Description: Protein of unknown function (DUF2544)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-142 459.0 5.1 2.4e-142 458.7 5.1 1.1 1 NP_416835.2
Domain annotation for each sequence (and alignments):
>> NP_416835.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 458.7 5.1 2.4e-142 2.4e-142 1 246 [] 44 273 .] 44 273 .] 1.00
Alignments for each domain:
== domain 1 score: 458.7 bits; conditional E-value: 2.4e-142
DUF2544 1 lkiatpeavyvgeykssswllsghrkgeiltavswsgpepapkvklkdydqtvskaacknlpsnwrncgsytlevivsaeiesdyscpwlvsshivat 98
lki++p+avyvgeykss+wl++ geil++vswsgp+pap+vkl++y+q+++ka+c++lps+w ncg+yt+evivsaeies++scpwlv
NP_416835.2 44 LKIMMPSAVYVGEYKSSQWLMT----GEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGW-NCGYYTFEVIVSAEIESYFSCPWLV------- 129
69********************....***************************************.*************************....... PP
DUF2544 99 tfitneseaspggvtysgpdsrdsvcpkvsvdtydvswdenvvkkkklltldatggvvektlstylmkdgklcdsskldergaycrfvasgitltvlg 196
i+n+seaspggvty+gpds+d++cp+vsv++ydvsw+en+v+k+klltl++tggvvektlstylmkdgklcds++++e+g+ycr+va++it+t++g
NP_416835.2 130 --IMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASG 225
..************************************************************************************************ PP
DUF2544 197 cdkaevsvsavdhpitdkelhdivvavdtrsiqsgqidstcrfqyildel 246
cdkaevsv++++hpitdk+lhd+vv+vdt+s+q+ idstcrfqyil+el
NP_416835.2 226 CDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQP--IDSTCRFQYILNEL 273
**********************************..*************8 PP
Or compare NP_416835.2 to CDD or PaperBLAST