NP_565184.1 has 333 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-61 191.5 13.9 1.1e-60 191.2 13.9 1.1 1 NP_565184.1
Domain annotation for each sequence (and alignments):
>> NP_565184.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 191.2 13.9 1.1e-60 1.1e-60 4 250 .. 96 316 .. 93 317 .. 0.92
Alignments for each domain:
== domain 1 score: 191.2 bits; conditional E-value: 1.1e-60
DUF92 4 lllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyalleske 101
+++ + l++sG++aa+l+g+l++ a +g a+fll++++f++g+++Tkvk+ +Ke++g+ae+++g+R++ V++++++++++a+l+ +++
NP_565184.1 96 IFVLGSPLLVTGLSASGIAAAFLLGTLTWRA-YGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLS-IYQVGG 191
556666677789*******************.8889******************************************************6.566444 PP
DUF92 102 llaelssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGllGsl 199
+ s+l+ lgfv+s++++ +DT++SE+Gk+++k+++l tt+k vp+Gt+G++sl+Gtlagll+++++a ++++l++ + + +++++la +++l
NP_565184.1 192 AA--FSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEGTLAGLLASFFLASVGCFLGQI--TPPEAAVCVLASQIANL 285
44..4789***************************************************************99888854..6899************* PP
DUF92 200 lDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllg 250
+S++GA +q + +G+++l+N++VN+++ lg
NP_565184.1 286 GESIIGASFQDK--------------------EGFKWLNNDVVNVINISLG 316
************....................8*************98876 PP
Or compare NP_565184.1 to CDD or PaperBLAST