PaperBLAST – Find papers about a protein or its homologs

 

Align NP_588278.2 to PF08550 (DUF1752)

NP_588278.2 has 855 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.7e-16   44.7   1.9    1.2e-15   43.4   1.9    1.8  1  NP_588278.2  


Domain annotation for each sequence (and alignments):
>> NP_588278.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.4   1.9   1.2e-15   1.2e-15       1      27 [.      41      67 ..      41      68 .. 0.97

  Alignments for each domain:
  == domain 1  score: 43.4 bits;  conditional E-value: 1.2e-15
      DUF1752  1 lWkvytkckdslpngeRLENlSWRlWn 27
                 lWk+++k+k++l+ng+R ENl+WRl++
  NP_588278.2 41 LWKMFSKAKSELSNGRRVENLTWRLMS 67
                 7*************************7 PP



Or compare NP_588278.2 to CDD or PaperBLAST