NP_598691.1 has 420 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.2e-17 49.1 1.5 1.4e-10 27.9 0.0 2.4 2 NP_598691.1
Domain annotation for each sequence (and alignments):
>> NP_598691.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.9 0.0 1.4e-10 1.4e-10 2 63 .. 46 101 .. 45 103 .. 0.81
2 ! 20.5 0.3 2.8e-08 2.8e-08 112 150 .] 103 142 .. 100 142 .. 0.94
Alignments for each domain:
== domain 1 score: 27.9 bits; conditional E-value: 1.4e-10
DUF3456 2 CeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekm 63
C+ C+al+d++++ l+++ + +f ++ +++k ky+ Se+rl+e+le+vC++
NP_598691.1 46 CHTCRALVDNFNKGLERTIRD------NFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSRS 101
***************665443......3444455556799*******************985 PP
== domain 2 score: 20.5 bits; conditional E-value: 2.8e-08
DUF3456 112 kaCerlvEeyEdeieelykkeqee.edlekkLCserskeC 150
+ C+rl+E E+ +e++ ++ q+e dl ++LCs+ k+C
NP_598691.1 103 FECHRLLELSEELVENWWFHRQQEaPDLFQWLCSDSLKLC 142
78********************************998888 PP
Or compare NP_598691.1 to CDD or PaperBLAST