NP_608361.3 has 1746 amino acids
Query: DUF2428 [M=259] Accession: PF10350.13 Description: THADA/TRM732, DUF2428 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.6e-81 259.5 1.2 4.5e-81 258.0 1.2 1.8 1 NP_608361.3 Domain annotation for each sequence (and alignments): >> NP_608361.3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 258.0 1.2 4.5e-81 4.5e-81 2 253 .. 839 1106 .. 838 1113 .. 0.91 Alignments for each domain: == domain 1 score: 258.0 bits; conditional E-value: 4.5e-81 DUF2428 2 llerllelceriwsvvlpvlsddspeghlpedledeeee.sk.se..e..eeeee.....ltaqvvlscsWralkeaslllgtivekvpleteksk 86 ++++l+++c ++svvlpv+s+ speghlpe ++e+++ + + e e +t+q++l+c+Wr+ ke++l+lg++v+++ple+e+++ NP_608361.3 839 YIDELVTMCLAVSSVVLPVVSSASPEGHLPETCDQETDQpLTnVLdrQlsRE--EllqvrTTPQMILLCAWRSSKEVCLILGELVQRAPLEEEEDE 932 789******************************9887776553333414322..23457899*******************************999 PP DUF2428 87 eds......llskeqlekigelffeqLlelrHrGAfetvyvgftalcqrllrskdselsqlpeqwleelleeik........skslsitRRSAGlP 168 e++ lls++qle+ige+f+++L+e++HrGAfe++yvgft+lc+r+++s++ +l+qlp qw++e++++++ +l++tRRSAG+P NP_608361.3 933 EQQqqqgdfLLSRAQLEAIGEHFLQLLAETKHRGAFEQAYVGFTMLCRRFWHSESVRLNQLPGQWVDEAMAMVSgqeewagkGARLCATRRSAGMP 1028 9889*****************************************************************************99************* PP DUF2428 169 flilailssepksskkklLkkamkeLleiakkpaeseeeseseeksdlpqvhalNiLraifrdskLgeevspyvaeglelaiegf 253 f+++a++ +e k +++ +L ++m++Lle++++ ++ + +++ halNi+ra+fr+s+L+e v++++a+g+++a++g+ NP_608361.3 1029 FMLQALVGTELKLGTHATLYRCMNRLLEVCER-------RTGGAAGITARSHALNIMRALFRSSELAELVTEFMARGIQCALDGL 1106 *************99***************94.......344477899***********************************96 PP
Or compare NP_608361.3 to CDD or PaperBLAST