NP_610547.1 has 189 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-42 130.1 2.8 5.4e-42 129.9 2.8 1.0 1 NP_610547.1
Domain annotation for each sequence (and alignments):
>> NP_610547.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.9 2.8 5.4e-42 5.4e-42 1 150 [] 26 172 .. 26 172 .. 0.98
Alignments for each domain:
== domain 1 score: 129.9 bits; conditional E-value: 5.4e-42
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskrtlkrlasrkgvkvelgikyel 98
kC++Cka+++eleea++k++p+k dv+gfrld +g++ +kk+++ kSe++ltel+e++Cekm+dY +++k+++k tl ++ +g +++++ + ++
NP_610547.1 26 KCHVCKAVVTELEEAIAKEDPHKMADVSGFRLDAQGNSISKKVRLVKSEMFLTELMEKICEKMDDYLKATYKSNGKFTLLKMII-NG-QMNPDSSLVD 121
8*********************************************************************************99.57.8********* PP
DUF3456 99 wdedsaevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCserskeC 150
+ +d ++nksl ++C++++E+ ++ ++++++ e+ +dl+ k+Cse++++C
NP_610547.1 122 FVQD-GDLNKSLGHFCNEVLEDNDEIFVKAFQAEELGNDLDIKICSEQASYC 172
****.9***************************8888***********9999 PP
Or compare NP_610547.1 to CDD or PaperBLAST